User:DCDuring/List of sequenced animal genomes/List of sequenced animal genomes 2016/October 2014

< User:DCDuring‎ | List of sequenced animal genomes

Porifera edit

Amphimedon queenslandica ^WSp, a sponge (2009[1])

Ctenophora edit

Mnemiopsis leidyi ^WSp, (order Lobata ^WSp) (2012[2])

Placozoa edit

Trichoplax adhaerens, a placozoan (2008[3])

Cnidaria edit

Hydra magnipapillata, a model medusozoan (2010[4])
Nematostella vectensis, a model anemone (starlet sea anemone) (2007[5])

Deuterostomia edit

Echinoderms edit

Strongylocentrotus purpuratus, a sea urchin and model deuterostome (2006[6])

Hemichordates edit

Saccoglossus kowalevskii, an acorn worm (2009[7])

Urochordates edit

Ciona intestinalis, a tunicate (2003[8])
Ciona savignyi, a tunicate (2007[9])

Cephalochordates edit

Branchiostoma floridae, a lancelet (2008[10])

Cyclostomes edit

Petromyzon marinus, a lamprey (2009,[11] 2013[12])

Cartilaginous Fish edit

Callorhinchus milii, an elephant shark (2007[13])

Bony Fish edit

Order Beloniformes

Oryzias latipes, medaka (2007)[14]

Order Coelacanthiformes

Latimeria chalumnae, West Indian Ocean coelacanth and oldest known living lineage of Sarcopterygii (2013[15][16])

Order Cypriniformes

Danio rerio, a zebrafish (2007[17])

Order Cyprinodontiformes

Xiphophorus maculatus, platyfish (2013[18])

Order Esociformes

Esox lucius, northern pike (2014[19])

Order Gadiformes

Gadus morhua, Atlantic cod (2011[20])

Order Gasterosteiformes

Gasterosteus aculeatus, three-spine stickleback (2006, 2012[21])

Order Lepisosteiformes

Lepisosteus oculatus, spotted gar [22]

Order Salmoniformes

Oncorhynchus mykiss, rainbow trout (2014[23])

Order Tetraodontiformes

Takifugu rubripes, a puffer fish ([24] International Fugu Genome Consortium[25] 2002[26])
Tetraodon nigroviridis, a puffer fish (2004[27])

Amphibians edit

Xenopus tropicalis, western clawed frog (2010[28])

Reptiles edit

Order Crocodylia

Crocodylus porosus, saltwater crocodile (2007)[29]
Alligator mississippiensis, American alligator (2012)[30]
Gavialis gangeticus, Indian gharial (2012)[31]

Order Squamata

Anolis carolinensis JBL SC #1, green anole lizard (2011[32])
Python molurus bivittatus, Burmese python (2013)[33]
Ophiophagus hannah, king cobra (2013)[34]

Order Testudines (Chelonii)

Chelonia mydas, green sea turtle (2013[35])
Pelodiscus sinensis, soft-shelled turtle (2013[35])
Chrysemys picta bellii, western painted turtle (2013)[36]

Birds edit

Order Anseriformes

Anas platyrhynchos, Template:WPLook (or wild duck) (2013[37])

Order Falconiformes

Falco cherrug, Template:WPLook (2013[38])
Falco peregrinus, peregrine falcon (2013[38])

Order Galliformes

Gallus gallus, chicken (2004[39])
Meleagris gallopavo, Template:WPLook (2011[40])
Tetrao tetrix ^WSp ⇒ Lyrurus tetrix, black grouse (2014[41])

Order Passeriformes

Ficedula albicollis ^WSp, Template:WPLook (2012[42])
Ficedula hypoleuca ^WSp, Template:WPLook (2012[42])
Taeniopygia guttata ^WSp, zebra finch (2010[43])

Mammals edit

Subclass Prototheria, Order Monotremata, Family Ornithorhynchidae

Ornithorhynchus anatinus, Platypus (2007[44])

Subclass Theria (Marsupials and Placental Mammals)

Monodelphis domestica, gray short-tailed opossum (2007[45])

Sarcophilus harrisii, Tasmanian devil ([46])

Macropus eugenii, Tammar wallaby (2011[47])

Phascolarctos cinereus, koala (2013 draft[48])

Erinaceus europaeus, Western European hedgehog ([49])

Megaderma lyra, greater false vampire bat (2013[50])

Pteronotus parnellii, Parnell's mustached bat (2013[50])

Pteropus vampyrus, fruit bat (2012[51])
Eidolon helvum, Old World fruit bat (2013[50])

Rhinolophus ferrumequinum. greater horseshoe bat (2013[50])

Myotis lucifugus, little brown bat (2010[52])

Otolemur garnettii, small-eared galago, or bushbaby ([53])

Macaca mulatta, rhesus macaque (2007[54])

Pongo pygmaeus/Pongo abelii, Orangutan (Borneo/Sumatra) (2011[55])

Gorilla gorilla, western gorilla (2012[56])
Homo sapiens, Modern Human (Draft 2001[57][58] Complete 2006[59])
Homo neanderthalensis, Neanderthal (Draft 2010[60])
Pan troglodytes, Chimpanzee (2005[61])
Pan paniscus, Bonobo (2012[62])

Callithrix jacchus, Marmoset (2010,[63] whole genome 2014[64])

Felis silvestris catus, Cat (2007[65])
Panthera leo, African Lion (2013[66])
Panthera leo krugeri, white lion (2013[66])
Panthera tigris altaica, Amur tiger (also called Siberian Tiger) (2013[66])
Panthera tigris tigris, Bengal Tiger (2013[66]
Panthera uncia, Snow Leopard (2013[66])

Canis lupus familiaris, Dog (2005[67])

Ailuropoda melanoleuca, Giant panda (2010[68])

Tursiops truncatus, Bottlenosed dolphin (2012[51])

Loxodonta africana, African Elephant (2009[69])

Equus ferus caballus, Horse (2009[70])

Sus scrofa, Pig (2012[71])

Bos grunniens, Yak 2012 ([72])
Bos primigenius indicus, zebu or Brahman cattle (2012[73])
Bos primigenius taurus, Cow 2009 ([74])

Mus musculus Strain: C57BL/6J, Mouse (2002[75])
Rattus norvegicus, Rat (2004[76])

Oryctolagus cuniculus, European rabbit (2010[49][77])

Protostomia edit

Insects edit

Coleoptera edit

Dendroctonus ponderosae ^WSp Hopkins, Beetle (Template:WPLook) (2013[78])
Tribolium castaneum ^WSp Strain:GA-2, Beetle (Template:WPLook) (2008[79])

Diptera edit

Aedes aegypti Strain:LVPib12, Mosquito (Vector of dengue fever, etc.) (2007[80])
Anopheles darlingi ^WSp
Anopheles gambiae ^WSp Strain: PEST, Mosquito (Vector of malaria) (2002[81])
Anopheles gambiae Strain: M, Mosquito (Vector of malaria) (2010[82])
Anopheles gambiae Strain: S, Mosquito (Vector of malaria) (2010)[82])
Anopheles sinensis ^WSp, mosquito (vector of vivax malaria, lymphatic filariasis and Setaria infections, (2014)[83]
Anopheles stephensii ^WSp
Clogmia albipunctata ^WSp, Template:WPLook (Transcriptome 2013[84])
Culex quinquefasciatus ^WSp, Mosquito (Vector of West Nile virus, filariasis etc.) (2010[85])
Drosophila ananassae ^WSp, Template:WPLook (2007[86])
Drosophila biarmipes ^WSp, Fruit fly (2011[87])
Drosophila bipectinata ^WSp, Fruit fly (2011[87])
Drosophila erecta ^WSp, Fruit fly (2007[86])
Drosophila elegans ^WSp, Fruit fly (2011[87])
Drosophila eugracilis ^WSp, Fruit fly (2011[87])
Drosophila ficusphila ^WSp, Fruit fly (2011[87])
Drosophila grimshawi ^WSp, Fruit fly (2007[86])
Drosophila kikkawai ^WSp, Fruit fly (2011[87])
Drosophila melanogaster, Fruit fly (Model organism) (2000[88])
Drosophila mojavensis ^WSp, Fruit fly (2007[86])
Drosophila persimilis ^WSp, Fruit fly (2007[86])
Drosophila pseudoobscura ^WSp, Fruit fly (2005[89])
Drosophila rhopaloa ^WSp, Fruit fly (2011[87])
Drosophila santomea ^WSp, Fruit fly ([90])
Drosophila sechellia ^WSp, Fruit fly (2007[86])
Drosophila simulans ^WSp, Fruit fly (2007[86])
Drosophila takahashi ^WSp, Fruit fly (2011[87])
Drosophila virilis ^WSp, Fruit fly (2007[86])
Drosophila willistoni ^WSp, Fruit fly (2007[86])
Drosophila yakuba ^WSp, Fruit fly (2007[86])
Episyrphus balteatus ^WSp, hoverfly (Transcriptome 2011[91])
Megaselia abdita ^WSp, scuttle fly (Transcriptome 2013[84])

Hemiptera edit

Acyrthosiphon pisum ^WSp, Aphid (Template:WPLook) (2010[92])

Hymenoptera edit

Acromyrmex echinatior ^WSp colony Ae372 Ant (Template:WPLook) (2011[93])
Apis mellifera ^WSp Bee (honey bee), (Model for eusocial behavior) (2006[94])
Atta cephalotes ^WSp, Ant (leaf-cutter ant) (2011[95])
Camponotus floridanus ^WSp, Ant (2010[96])
Herpegnathos saltator ^WSp, Ant (2010[96])
Linepithema humile ^WSp, Ant (Template:WPLook) (2011[97])
Nasonia giraulti ^WSp, Wasp (Parasitoid wasp) (2010[98])
Nasonia longicornis ^WSp, Wasp (Parasitoid wasp) (2010[98])
Nasonia vitripennis ^WSp, Wasp (Parasitoid wasp; Model organism) (2010[98])
Pogonomyrmex barbatus ^WSp, Ant (Template:WPLook) (2011[99])
Solenopsis invicta ^WSp, Ant (fire ant) (2011[100])

Lepidoptera edit

Bombyx mori Strain:p50T, Moth (domestic silk worm) (2004[101])
Danaus plexippus, Butterfly (monarch butterfly) (2011[102])
Heliconius melpomene ^WSp, Butterfly (2012)
Plutella xylostella ^WSp, Moth (Template:WPLook) (2013[103])

Phthiraptera edit

Pediculus humanus ^WSp, Louse (sucking louse; Parasite) (2010[104])

Crustaceans edit

Daphnia pulex ^WSp, water flea (2007[105][106][107])

Chelicerates edit

Ixodes scapularis ^WSp, deer tick (vector of meningitis and Lyme disease) (2008[108])
Tetranychus urticae ^WSp Template:WPLook (2011[109])

Molluscs edit

Crassostrea gigas ^WSp, Template:WPLook (2012[110])
Lottia gigantea ^WSp, Template:WPLook (2013[111])

Platyhelminthes edit

Clonorchis sinensis ^WSp, Liver fluke (Human pathogen) (Draft 2011[112])
Echinococcus granulosus ^WSp, Tapeworm (Dog pathogen) (2013,[113] 2013[114])
Echinococcus multilocularis ^WSp, Tapeworm (2013[113])
Hymenolepis microstoma ^WSp, Tapeworm (2013[113])
Schistosoma haematobium ^WSp, Schistosome (Human pathogen) (2012[115])
Schistosoma japonicum ^WSp, Schistosome (Human pathogen) (2009[116])
Schistosoma mansoni ^WSp, Schistosome (Human pathogen) (2009,[117] 2012[118])
Schmidtea mediterranea ^WSp, Planarian (Model organism) (2006[119][120])
Taenia solium ^WSp, Tapeworm (2013[113])

Nematodes edit

Ascaris suum ^WSp, Human pathogen (2011 [121])
Brugia malayi ^WSp, Strain:TRS, Human pathogen (2007[122])
Caenorhabditis briggsae ^WSp (2003[123])
Caenorhabditis elegans, Strain:Bristol N2, Model organism (1998[124])
Meloidogyne hapla ^WSp, Template:WPLook (Plant pathogen) (2008[125])
Meloidogyne incognita ^WSp, Template:WPLook (Plant pathogen) (2008[126])
Pristionchus pacificus ^WSp, Model invertebrate (2008[127])

Annelids edit

Capitella teleta ^WSp, Polychaete (2007,[128] 2013[111])
Helobdella robusta ^WSp, Leech (2007,[129] 2013[111])

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