Domain "Archaea"

"Acidobacteria" - "Actinobacteria" - "Aquificae" - "Armatimonadetes" - "Bacteroidetes" - "Balneolaeota" - "Caldiserica" - "Calditrichaeota" - "Chlamydiae" - "Chlorobi" - "Chloroflexi" - "Chrysiogenetes" - "Cyanobacteria" - "Deferribacteres" - "Deinococcus-Thermus" - "Dictyoglomi" - "Elusimicrobia" - "Fibrobacteres" - "Firmicutes" - "Fusobacteria" - "Gemmatimonadetes" - "Kiritimatiellaeota" - "Lentisphaerae" - "Nitrospira" or "Nitrospirae" - "Planctomycetes" or "Planctobacteria" - "Proteobacteria" - "Rhodothermaeota" - "Spirochaetes" or "Spirochaetae" - "Synergistetes" - "Tenericutes" - "Thermodesulfobacteria" - "Thermotogae" - "Verrucomicrobia" - unassigned

Phylum "Acidobacteria" (R)

Class Acidobacteria (R)

Order Acidobacteriales

Family Acidobacteriaceae

Acidicapsa, Acidipila, Acidobacterium, Arenimicrobium, Bryocella, Edaphobacter, Granulicella, Occallatibacter, Silvibacterium, Telmatobacter, Terracidiphilus, Terriglobus

Family Bryobacteraceae

Bryobacter, Paludibaculum

Class Blastocatellia

Order Blastocatellales

Family Blastocatellaceae

Aridibacter, Blastocatella, Stenotrophobacter, Tellurimicrobium

Family Pyrinomonadaceae

Brevitalea, Pyrinomonas

Class Holophagae

Order Acanthopleuribacterales

Family Acanthopleuribacteraceae

Acanthopleuribacter

Order Holophagales

Family Holophagaceae

Geothrix, Holophaga

Class unassigned

Order unassigned

Family unassigned

Luteitalea, Vicinamibacter

Phylum "Actinobacteria" (R)

Class Acidimicrobiia

Order Acidimicrobiales

Suborder "Acidimicrobineae"

Family Acidimicrobiaceae

Acidimicrobium, Ferrimicrobium, Ferrithrix, Ilumatobacter

Family Iamiaceae

Family unassigned

Aciditerrimonas

Class Actinobacteria (R)

Order Acidothermales

Family Acidothermaceae (NR)

Acidothermus

Order Actinomycetales

Suborder Actinomycineae

Family Actinomycetaceae

Actinobaculum, Actinomyces, Actinotignum, Arcanobacterium, Falcivibrio, Flaviflexus, Mobiluncus, Trueperella, Varibaculum

Suborder Actinopolysporineae

Family Actinopolysporaceae

Actinopolyspora, Haloactinomyces

Suborder Catenulisporineae

Family Actinospicaceae

Actinocrinis, Actinospica

Family Catenulisporaceae

Catenulispora

Suborder Corynebacterineae

Family Nocardiaceae

NOTE: See also Gordoniaceae [Zhi et al. 2009 propose to combine the families Nocardiaceae and Gordoniaceae (genera Gordonia, Millisia and Skermania) in an emended family Nocardiaceae]

Family Segniliparaceae

Segniliparus

Family Tsukamurellaceae

Tsukamurella

Family unassigned

Suborder Glycomycineae

Family Glycomycetaceae

Glycomyces, Haloglycomyces, Salilacibacter, Salininema, Stackebrandtia

Suborder Jiangellineae

Family Jiangellaceae

Haloactinopolyspora, Jiangella, Phytoactinopolyspora

Suborder Micromonosporineae

Family Micromonosporaceae

Actinaurispora, Actinocatenispora, Actinoplanes, Actinorhabdospora, Allocatelliglobosispora, Amorphosporangium, Ampullariella, Asanoa, Catellatospora, Catelliglobosispora, Catenuloplanes, Couchioplanes, Dactylosporangium, Hamadaea, Jishengella, Krasilnikovia, Longispora, Luedemannella, Mangrovihabitans, Micromonospora, Phytohabitans, Phytomonospora, Pilimelia, Planopolyspora, Planosporangium, Plantactinospora, Polymorphospora, Pseudosporangium, Rhizocola, Rugosimonospora, Salinispora, Spirilliplanes, Verrucosispora, Virgisporangium, Xiangella

Suborder Propionibacterineae

Family Nocardioidaceae

Actinopolymorpha Aeromicrobium Flindersiella Hongia Kribbella Marmoricola Mumia Nocardioides Pimelobacter Tenggerimyces Thermasporomyces

Family Propionibacteriaceae

Acidipropionibacterium, Aestuariimicrobium, Arachnia, Auraticoccus, Brooklawnia, Cutibacterium, Friedmanniella, Granulicoccus, Luteococcus, Mariniluteicoccus, Microlunatus, Micropruina, Naumannella, Propionibacterium, Propionicicella, Propioniciclava, Propionicimonas, Propioniferax, Propionimicrobium, Pseudopropionibacterium, Raineyella, Tessaracoccus

Suborder Pseudonocardineae

Family Pseudonocardiaceae

Actinoalloteichus, Actinobispora, Actinocrispum, Actinokineospora, Actinomycetospora, Actinophytocola, Actinorectispora, Actinosynnema, Alloactinosynnema, Allokutzneria, Amycolata, Amycolatopsis, Bounagaea, Crossiella, Faenia, Goodfellowiella, Haloechinothrix, Herbihabitans, Kibdelosporangium, Kutzneria, Labedaea, Lechevalieria, Lentzea, Longimycelium, Prauserella, Pseudoamycolata, Pseudonocardia, Saccharomonospora, Saccharopolyspora, Saccharothrix, Sciscionella, Streptoalloteichus, Thermobispora, Thermocrispum, Umezawaea, Yuhushiella

Suborder Streptomycineae

Family Streptomycetaceae

Actinopycnidium, Actinosporangium, Allostreptomyces, Chainia, Elytrosporangium, Kitasatoa, Kitasatospora, Microellobosporia, Streptacidiphilus, Streptomyces, Streptoverticillium

Suborder Streptosporangineae

Family Nocardiopsaceae

Allosalinactinospora, Haloactinospora, Lipingzhangella, Marinactinospora, Murinocardiopsis, Nocardiopsis, Salinactinospora, Spinactinospora, Streptomonospora, Thermobifida

Family Streptosporangiaceae

Acrocarpospora, Herbidospora, Microbispora, Microtetraspora, Nonomuraea, Planobispora, Planomonospora, Planotetraspora, Sphaerimonospora, Sphaerisporangium, Streptosporangium, Thermoactinospora, Thermocatellispora, Thermopolyspora

Family Thermomonosporaceae

Family unassigned

Allonocardiopsis, Sinosporangium

Order Bifidobacteriales

Family Bifidobacteriaceae

Aeriscardovia, Alloscardovia, Bifidobacterium, Bombiscardovia, Galliscardovia, Gardnerella, Metascardovia, Neoscardovia, Parascardovia, Pseudoscardovia, Scardovia

Order Frankiales

Family Cryptosporangiaceae

Cryptosporangium, Fodinicola

Family Frankiaceae

Frankia, Jatrophihabitans

Family Sporichthyaceae

Sporichthya

Family unassigned

Motilibacter

Order Geodermatophilales

Family Geodermatophilaceae

Blastococcus, Cumulibacter, Geodermatophilus, Modestobacter

Order Kineosporiales

Family Kineosporiaceae

Angustibacter, Kineococcus, Kineosporia, Pseudokineococcus, Quadrisphaera, Thalassiella

Order Micrococcales

Family Beutenbergiaceae

Beutenbergia, Miniimonas, Salana, Serinibacter

Family Bogoriellaceae

Bogoriella, Georgenia, Oceanitalea

Family Brevibacteriaceae

Brevibacterium, Sediminivirga, Spelaeicoccus

Family Cellulomonadaceae

Actinotalea, Cellulomonas, Oerskovia, Paraoerskovia, Pseudactinotalea, Sediminihabitans, Tropheryma, Tropicihabitans

Family Demequinaceae

Demequina, Lysinimicrobium

Family Dermabacteraceae

Brachybacterium, Dermabacter, Devriesea, Helcobacillus

Family Dermacoccaceae

Barrientosiimonas, Branchiibius, Calidifontibacter, Demetria, Dermacoccus, Flexivirga, Kytococcus, Luteipulveratus, Rudaeicoccus, Tamlicoccus, Yimella

Family Dermatophilaceae

Austwickia, Dermatophilus, Kineosphaera, Mobilicoccus, Piscicoccus, Tonsilliphilus

Family Intrasporangiaceae

Aquipuribacter, Arsenicicoccus, Fodinibacter, Humibacillus, Humihabitans, Intrasporangium, Janibacter, Knoellia, Kribbia, Lapillicoccus, Marihabitans, Monashia, Ornithinibacter, Ornithinicoccus, Ornithinimicrobium, Oryzihumus, Oryzobacter, Phycicoccus, Serinicoccus, Terrabacter, Terracoccus, Tetrasphaera

Family Jonesiaceae

Jonesia, Populibacterium

Family Microbacteriaceae

Agreia, Agrococcus, Agromyces, Allohumibacter, Alpinimonas, Amnibacterium, Arenivirga, Aurantimicrobium, Aureobacterium, Canibacter, Chryseoglobus, Clavibacter, Cnuibacter, Compostimonas, Conyzicola, Cryobacterium, Curtobacterium, Diaminobutyricibacter, Diaminobutyricimonas, Frigoribacterium, Frondihabitans, Glaciibacter, Glaciihabitans, Gryllotalpicola, Gulosibacter, Herbiconiux, Homoserinimonas, Huakuichenia, Humibacter, Klugiella, Labedella, Leucobacter, Lysinibacter, Lysinimonas, Marisediminicola, Microbacterium, Microcella, Microterricola, Mycetocola, Naasia, Okibacterium, Parafrigoribacterium, Phycicola, Plantibacter, Pontimonas, Pseudoclavibacter, Puzihella, Rathayibacter, Rhodoglobus, Rhodoluna, Salinibacterium, Schumannella, Subtercola, Yonghaparkia, Zimmermannella

Family Micrococcaceae

Acaricomes, Arthrobacter, Auritidibacter, Citricoccus, Enteractinococcus, Garicola, Glutamicibacter, Haematomicrobium, Kocuria, Micrococcoides, Micrococcus, Neomicrococcus, Nesterenkonia, Paenarthrobacter, Paeniglutamicibacter, Pseudarthrobacter, Pseudoglutamicibacter, Psychromicrobium, Renibacterium, Rothia, Sinomonas, Stomatococcus, Tersicoccus, Yaniella, Zhihengliuella

Family Promicromonosporaceae

Cellulosimicrobium, Isoptericola, Krasilnikoviella, Myceligenerans, Promicromonospora, Xylanibacterium, Xylanimicrobium, Xylanimonas

Family Rarobacteraceae

Rarobacter

Family Ruaniaceae

Haloactinobacterium, Ruania

Family Sanguibacteraceae

Sanguibacter

Family unassigned

Koreibacter, Luteimicrobium, Timonella

Order Nakamurellales

Family Nakamurellaceae

Humicoccus, Nakamurella, Saxeibacter

Order Nitriliruptorales

Family Nitriliruptoraceae

Nitriliruptor

Order unassigned

Family Mzabimycetaceae

Mzabimyces

Class Coriobacteriia

Order Coriobacteriales

Suborder "Coriobacterineae"

Family Coriobacteriaceae

Collinsella, Coriobacterium, Enorma, Parvibacter

Family Atopobiaceae

Atopobium, Olsenella

Order Eggerthellales

Family Eggerthellaceae

Adlercreutzia, Asaccharobacter, Cryptobacterium, Denitrobacterium, Eggerthella, Enterorhabdus, Gordonibacter, Paraeggerthella, Slackia

Class Nitriliruptoria

Order Egibacterales

Family Egibacteraceae

Egibacter

Order Egicoccales

Family Egicoccaceae

Egicoccus

Order Euzebyales

Family Euzebyaceae

Euzebya

Class Rubrobacteria

Order Gaiellales

Family Gaiellaceae

Gaiella

Order Rubrobacterales

Suborder "Rubrobacterineae"

Family Rubrobacteraceae

Rubrobacter

Order Solirubrobacterales

Family Conexibacteraceae

Conexibacter

Family Parviterribacteraceae

Parviterribacter

Family Patulibacteraceae

Patulibacter

Family Solirubrobacteraceae

Solirubrobacter

Class Thermoleophilia (NR)

Order Thermoleophilales (R)

Family Thermoleophilaceae (R)

Thermoleophilum

Phylum "Aquificae" (R)

Class Aquificae (R)

Order Aquificales

Family Aquificaceae

Aquifex, Calderobacterium, Hydrogenivirga, Hydrogenobacter, Hydrogenobaculum, Thermocrinis

Family Desulfurobacteriaceae

Balnearium, Desulfurobacterium, Phorcysia, Thermovibrio

Family Hydrogenothermaceae

Hydrogenothermus, Persephonella, Sulfurihydrogenibium, Venenivibrio

Family unassigned

Thermosulfidibacter

Phylum "Armatimonadetes" (R)

Class Armatimonadia (R)

Order Armatimonadales

Family Armatimonadaceae

Armatimonas

Family Chthonomonadaceae

Chthonomonas

Class Fimbriimonadia (R)

Order Fimbriimonadales

Family Fimbriimonadaceae

Fimbriimonas

Phylum "Bacteroidetes" (R)

Class "Saprospiria"

Order Saprospirales

Family Saprospiraceae

Aureispira, Haliscomenobacter, Lewinella, Membranicola, Phaeodactylibacter, Saprospira

Class Bacteroidia

Order Bacteroidales

Family Bacteroidaceae

Acetofilamentum, Acetomicrobium, Acetothermus, Anaerorhabdus, Bacteroides, Capsularis

Family Balneicellaceae

Balneicella

Family Lentimicrobiaceae

Lentimicrobium

Family Marinifilaceae

Ancylomarina

Family Marinilabiliaceae

Alkaliflexus, Alkalitalea, Anaerophaga, Carboxylicivirga, Geofilum, Labilibacter, Mangroviflexus, Marinilabilia, Natronoflexus, Thermophagus

Family Odoribacteraceae

Butyricimonas, Odoribacter

Family Porphyromonadaceae [missing genera]

Barnesiella, Coprobacter, Dysgonomonas, Falsiporphyromonas, Fermentimonas, Gabonibacter, Macellibacteroides, Microbacter, Muribaculum, Oribaculum, Paludibacter, Parabacteroides, Tannerella

Family Prevotellaceae

Alloprevotella, Hallella, Paraprevotella, Prevotella, Xylanibacter

Family Prolixibacteraceae [missing genera]

Draconibacterium, Mangrovibacterium, Mariniphaga, Roseimarinus, Tangfeifania

Family Rikenellaceae

Acetobacteroides, Alistipes, Anaerocella, Mucinivorans, Rikenella

Family unassigned

Phocaeicola, Sunxiuqinia

Order Marinilabiliales

Family Salinivirgaceae

Salinivirga

Class Chitinophagia

Order Chitinophagales

Family Chitinophagaceae

Arachidicoccus, Arvibacter, Asinibacterium, Balneola, Chitinophaga, Cnuella, Compostibacter, Crenotalea, Ferruginibacter, Filimonas, Flaviaesturariibacter, Flavihumibacter, Flavisolibacter, Flavitalea, Gracilimonas, Haoranjiania, Heliimonas, Hydrobacter, Hydrotalea, Lacibacter, Niabella, Niastella, Niveitalea, Panacibacter, Parasediminibacterium, Parasegetibacter, Pseudobacter, Pseudoflavitalea, Sediminibacterium, Segetibacter, Taibaiella, Terrimonas, Thermoflavifilum, Vibrionimonas

Family Hymenobacteraceae

Adhaeribacter, Hymenobacter, Pontibacter, Rufibacter

Class Cytophagia

Order Cytophagales

Family Bernardetiaceae

"Bernardetia", Garritya, Hugenholtzia

Family Catalimonadaceae

Catalinimonas

Family Cyclobacteriaceae

Algoriphagus, Aquiflexum, Belliella, Cecembia, Chimaereicella, Cyclobacterium, Echinicola, Fontibacter, Hongiella, Indibacter, Mariniradius, Mongoliibacter, Mongoliicoccus, Mongoliitalea, Negadavirga, Nitritalea, Shivajiella

Family Cytophagaceae

Arcicella, Arcticibacterium, Arsenicibacter, Cytophaga, Dyadobacter, Effluviibacter, Ekhidna, Emticicia, Fibrella, Fibrisoma, Flectobacillus, Flexibacter, Fluviimonas, Huanghella, Jiulongibacter, Lacihabitans, Larkinella, Leadbetterella, Litoribacter, Meniscus, Microscilla, Persicitalea, Pseudarcicella, Rhodocytophaga, Rhodonellum, Rudanella, Runella, Siphonobacter, Spirosoma, Sporocytophaga, Telluribacter

Family Flammeovirgaceae

Cesiribacter, Fabibacter, Fabivirga, Flammeovirga, Flexithrix, Fulvivirga, Imperialibacter, Limibacter, Marinicola, Marinoscillum, Marivirga, Nafulsella, Perexilibacter, Rapidithrix, Reichenbachiella, Roseivirga, Sediminitomix, Tunicatimonas

Family Microscillaceae

Eisenibacter

Family Mooreiaceae

Mooreia

Family Persicobacteraceae

Aureibacter, Fulvitalea, Persicobacter

Family Thermonemataceae

Thermonema

Family unassigned

Chryseolinea, Luteivirga, Ohtaekwangia, Thermoflexibacter

Class Flavobacteriia

Order Flavobacteriales

Family Blattabacteriaceae

Blattabacterium

Family Crocinitomicaceae

Brumimicrobium, Crocinitomix, Fluviicola, Lishizhenia, Salinirepens, Wandonia

Family Cryomorphaceae

Cryomorpha, Luteibaculum, Owenweeksia, Phaeocystidibacter, Salibacter

Family Flavobacteriaceae

Actibacter, Aequorivita, Aestuariibaculum, Aestuariicola, Aestuariivivens, Algibacter, Algitalea, Antarcticimonas, Apibacter, Aquibacter, Aquimarina, Arcticiflavibacter, Arenibacter, Arenitalea, Ascidiimonas, Aurantiacicella, Aureicoccus, Aureisphaera, Aureitalea, Aureivirga, Bergeyella, Bizionia, Capnocytophaga, Cellulophaga, Chishuiella, Chryseobacterium, Citreitalea, Cloacibacterium, Coenonia, Confluentibacter, Corallibacter, Costertonia, Croceibacter, Croceitalea, Cruoricaptor, Daejeonia, Dokdonia, Donghaeana, Elizabethkingia, Empedobacter, Epilithonimonas, Eudoraea, Euzebyella, Flagellimonas, Flavicella, Flavimarina, Flaviramulus, Flavirhabdus, Flavivirga, Flavobacterium, Formosa, Frondibacter, Fulvibacter, Gaetbulibacter, Gaetbulimicrobium, Galbibacter, Gangjinia, Gelatiniphilus, Gelidibacter, Geojedonia, Gillisia, Gilvibacter, Gramella, Hanstruepera, Hoppeia, Hwangdonia, Hyunsoonleella, Ichthyenterobacterium, Imtechella, Jejudonia, Jejuia, Joostella, Kaistella, Kordia, Kriegella, Krokinobacter, Lacinutrix, Leeuwenhoekiella, Leptobacterium, Litoribaculum, Lutaonella, Lutibacter, Lutimonas, Mangrovimonas, Maribacter, Mariniflexile, Marinirhabdus, Marinivirga, Maripseudobacter, Maritimimonas, Marixanthomonas, Meridianimaribacter, Mesoflavibacter, Mesonia, Moheibacter, Muricauda, Muriicola, Myroides, Namhaeicola, Neptunitalea, Nonlabens, Oceanihabitans, Olleya, Ornithobacterium, Persicivirga, Pibocella, Planktosalinus, [[]], Planobacterium, Polaribacter, Pontirhabdus, Postechiella, Pricia, Pseudofulvibacter, Pseudotenacibaculum, Pseudozobellia, Psychroflexus, Psychroserpens, Pustulibacterium, Riemerella, Robiginitalea, Sabulilitoribacter, Salegentibacter, Salinimicrobium, Sandarakinotalea, Saonia, Sediminibacter, Sediminicola, Sejongia, Seonamhaeicola, Siansivirga, Sinomicrobium, Snuella, Soonwooa, Spongiibacterium, Spongiiferula, Spongiimicrobium, Spongiimonas, Spongiivirga, Stanierella, Stenothermobacter, Subsaxibacter, Subsaximicrobium, Sungkyunkwania, Taeania, Tamlana, Tenacibaculum, Ulvibacter, Vitellibacter, Wautersiella, Weeksella, Wenyingzhuangia, Winogradskyella, Xanthomarina, Yeosuana, Zeaxanthinibacter, Zhouia, Zobellia, Zunongwangia

Family Ichthyobacteriaceae

Ichthyobacterium

Family Schleiferiaceae

Schleiferia

Class Sphingobacteriia

Order Sphingobacteriales

Family Filobacteriaceae

Filobacterium

Family Sphingobacteriaceae

Anseongella, Arcticibacter, Mucilaginibacter, Nubsella, Olivibacter, Parapedobacter, Pedobacter, Pelobium, Pseudosphingobacterium, Solitalea, Sphingobacterium

Family unassigned

Fodinibius

Class unassigned

Order unassigned

Family unassigned

Marinifilum, Toxothrix

Phylum "Balneolaeota" (NR)

Class Balneolia

Order Balneolales

Family Balneolaceae

Aliifodinibius, Rhodohalobacter

Family Soortiaceae

Soortia

Phylum "Caldiserica" (R)

Class Caldisericia

Order Caldisericales

Family Caldisericaceae

Caldisericum

Phylum "Calditrichaeota" (NR)

Class unassigned

Order unassigned

Family unassigned

Calorithrix

Phylum "Chlamydiae" (R)

Class Chlamydiia

Order Chlamydiales

Family Chlamydiaceae

Chlamydia, Chlamydophila

Order Parachlamydiales

Family Parachlamydiaceae

Neochlamydia, Parachlamydia

Family Simkaniaceae

Simkania

Family Waddliaceae

Waddlia

Phylum "Chlorobi" (R)

Class Chlorobea or "Chlorobia"

Order Chlorobiales

Family Chlorobiaceae

Ancalochloris, Chlorobaculum, Chlorobium, Chloroherpeton, Pelodictyon, Prosthecochloris

Class Dehalococcoidia

Order Dehalococcoidales

Family Dehalococcoidaceae

Dehalococcoides, Dehalogenimonas

Class Ignavibacteria

Order Ignavibacteriales

Family "Melioribacteraceae"

Melioribacter

Family Ignavibacteriaceae

Ignavibacterium

Phylum "Chloroflexi" (R)

Class Anaerolineae

Order Anaerolineales

Family Anaerolineaceae

Anaerolinea, Bellilinea, Flexilinea, Leptolinea, Levilinea, Longilinea, Ornatilinea, Pelolinea

Class Ardenticatenia

Order Ardenticatenales

Family Ardenticatenaceae

Ardenticatena

Class Caldilineae

Order Caldilineales

Family Caldilineaceae

Caldilinea, Litorilinea

Class Chloroflexia

Order Chloroflexales

Suborder Chloroflexineae

Family Oscillochloridaceae

Chloronema, Oscillochloris

Suborder Roseiflexineae

Family Roseiflexaceae

Heliothrix, Roseiflexus

Family Chloroflexaceae

Chloroflexus

Order Herpetosiphonales

Family Herpetosiphonaceae

Herpetosiphon

Order Kallotenuales

Family Kallotenuaceae

Kallotenue

Class Ktedonobacteria

Order Ktedonobacterales

Family Ktedonobacteraceae

Dictyobacter, Ktedonobacter

Family Thermosporotrichaceae

Thermosporothrix

Order Thermogemmatisporales

Family Thermogemmatisporaceae

Thermogemmatispora

Class Thermoflexia

Order Thermoflexales

Family Thermoflexaceae

Thermoflexus

Class Thermomicrobia

NOTE: See Phylum "Chloroflexi"

Subclass Sphaerobacteridae

Order Sphaerobacterales

Suborder "Sphaerobacterineae"

Family Sphaerobacteraceae

Nitrolancea, Sphaerobacter

Order Thermomicrobiales

Family Thermomicrobiaceae

Thermomicrobium

Phylum "Chrysiogenetes" (R)

Class Chrysiogenetes (R)

Order Chrysiogenales

Family Chrysiogenaceae

Chrysiogenes, Desulfurispira, Desulfurispirillum

Phylum "Cyanobacteria" (R)

NOTE: see the file Classification of Cyanobacteria

Class unassigned

Order Chroococcales

Family unassigned

Rubidibacter

Order Nostocales

Family "Rivulariaceae"

Phyllonema

Order Oscillatoriales

Family "Phormidiaceae"

Ancylothrix

Family unassigned

Halospirulina, Planktothricoides, Potamolinea

Order Pleurocapsales

Family unassigned

Foliisarcina

Order Prochlorales

Family "Prochlorococcaceae"

Prochlorococcus

Family Prochloraceae

Prochloron

Family Prochlorotrichaceae

Prochlorothrix

Phylum "Deferribacteres" (R)

Class Deferribacteres (R)

Order Deferribacterales

Family Deferribacteraceae

Calditerrivibrio, Deferribacter, Denitrovibrio, Flexistipes, Geovibrio, Mucispirillum, Seleniivibrio

Family unassigned

Caldithrix

Phylum "Deinococcus-Thermus" (R)

Class Deinococci

Order Deinococcales

Family Deinococcaceae

Deinobacter, Deinobacterium, Deinococcus

Family Trueperaceae

Truepera

Order Thermales

Family Thermaceae

Marinithermus, Meiothermus, Oceanithermus, Rhabdothermus, Thermus, Vulcanithermus

Phylum "Dictyoglomi" (R)

Class Dictyoglomia

Order Dictyoglomales

Family Dictyoglomaceae

Dictyoglomus

Phylum "Elusimicrobia" (R)

Class Elusimicrobia (R)

Order Elusimicrobiales

Family Elusimicrobiaceae

Elusimicrobium

Phylum "Fibrobacteres" (R)

Class Chitinispirillia

Order Chitinispirillales

Family Chitinispirillaceae

Chitinispirillum

Class Chitinivibrionia

Order Chitinivibrionales

Family Chitinivibrionaceae

Chitinivibrio

Class Fibrobacteria

Order Fibrobacterales

Family Fibrobacteraceae

Fibrobacter

Phylum "Firmicutes" (R)

Class Bacilli or Firmibacteria

Order Bacillales

Family Alicyclobacillaceae

Alicyclobacillus, Effusibacillus, Kyrpidia, Tumebacillus

Family Bacillaceae

Aeribacillus, Alkalibacillus, Alkalicoccus, Allobacillus, Alteribacillus, Amphibacillus, Anaerobacillus, Anoxybacillus, Aquibacillus, Aquisalibacillus, Aureibacillus, Bacillus, Caldalkalibacillus, Caldibacillus, Calditerricola, Cerasibacillus, Compostibacillus, Domibacillus, Falsibacillus, Fermentibacillus, Filobacillus, Geobacillus, Gracilibacillus, Halalkalibacillus, Halobacillus, Halolactibacillus, Hydrogenibacillus, Lentibacillus, Lysinibacillus, Marinococcus, Melghiribacillus, Microaerobacter, Natribacillus, Natronobacillus, Oceanobacillus, Ornithinibacillus, Paraliobacillus, Paucisalibacillus, Pelagibacillus, Pelagirhabdus, Piscibacillus, Polygonibacillus, Pontibacillus, Psychrobacillus, Saccharococcus, Salibacillus, Salibacterium, Salimicrobium, Salinibacillus, Salipaludibacillus, Salirhabdus, Salisediminibacterium, Saliterribacillus, Salsuginibacillus, Sediminibacillus, Sinibacillus, Streptohalobacillus, Tenuibacillus, Terribacillus, Terrilactibacillus, Thalassobacillus, Virgibacillus, Viridibacillus, Vulcanibacillus

Family Listeriaceae

Brochothrix, Listeria

Family Paenibacillaceae

Ammoniibacillus, Ammoniphilus, Aneurinibacillus, Brevibacillus, Chengkuizengella, Cohnella, Fontibacillus, Gorillibacterium, Marinicrinis, Oxalophagus, Paenibacillus, Saccharibacillus, Thermobacillus

Family Pasteuriaceae

Pasteuria

Family Planococcaceae

Bhargavaea, Caryophanon, Chryseomicrobium, Filibacter, Jeotgalibacillus, Kurthia, Marinibacillus, Paenisporosarcina, Planococcus, Planomicrobium, Savagea, Sporosarcina, Ureibacillus

Family Sporolactobacillaceae

Caenibacillus, Pullulanibacillus, Scopulibacillus, Sinobaca, Sporolactobacillus, Tuberibacillus

Family Staphylococcaceae

Abyssicoccus, Aliicoccus, Auricoccus, Corticicoccus, Jeotgalicoccus, Macrococcus, Nosocomiicoccus, Salinicoccus, Staphylococcus

Family Thermoactinomycetaceae

Baia, Croceifilum, Desmospora, Geothermomicrobium, Kroppenstedtia, Laceyella, Lihuaxuella, Marininema, Marinithermofilum, Mechercharimyces, Melghirimyces, Novibacillus, Paludifilum, Planifilum, Polycladomyces, Risungbinella, Salinithrix, Seinonella, Shimazuella, Thermoactinomyces, [[Thermoflavimicrobium]

Family unassigned

Alkalilactibacillus, Chungangia, Desulfuribacillus, Exiguobacterium, Gemella, Geomicrobium, Rummeliibacillus, Solibacillus, Thermicanus

Order Lactobacillales

Family Aerococcaceae

Abiotrophia, Aerococcus, Dolosicoccus, Eremococcus, Facklamia, Globicatella, Ignavigranum

Family Carnobacteriaceae

Agitococcus, Alkalibacterium, Allofustis, Alloiococcus, Atopobacter, Atopococcus, Atopostipes, Carnobacterium, Desemzia, Dolosigranulum, Granulicatella, Isobaculum, Jeotgalibaca, Lacticigenium, Lactosphaera, Marinilactibacillus, Pisciglobus, Trichococcus

Family Enterococcaceae

Bavariicoccus, Catellicoccus, Enterococcus, Melissococcus, Pilibacter, Tetragenococcus, Vagococcus

Family Lactobacillaceae

Lactobacillus, Paralactobacillus, Pediococcus, Sharpea

Family Leuconostocaceae

Convivina, Fructobacillus, Leuconostoc, Oenococcus, Weissella

Family Streptococcaceae

Lactococcus, Lactovum, Streptococcus

Class Clostridia

Order Clostridiales

Family "Catabacteriaceae"

Catabacter

Family Caldicoprobacteraceae

Caldicoprobacter

Family Clostridiaceae

Alkaliphilus, Anaerobacter, Anaeromicrobium, Anaerosalibacter, Anaerosporobacter, Anoxynatronum, Asaccharospora, Brassicibacter, Butyricicoccus, Caldisalinibacter, Caloramator, Caloranaerobacter, Caminicella, Cellulosibacter, Clostridiisalibacter, Clostridium, Crassaminicella, Falcatimonas, Fervidicella, Fonticella, Geosporobacter, Haloimpatiens, Hathewaya, Hungatella, Hydrogenispora, Keratinibaculum, Lactonifactor, Lutispora, Maledivibacter, Marinisporobacter, Natronincola, Oceanirhabdus, Oxobacter, Paramaledivibacter, Proteiniclasticum, Saccharofermentans, Salimesophilobacter, Sarcina, Serpentinicella, Sporosalibacterium, Tepidimicrobium, Thermobrachium, Thermohalobacter, Thermotalea, Tindallia, Wukongibacter

Family Defluviitaleaceae

Defluviitalea

Family Eubacteriaceae

Acetobacterium, Agathobaculum, Alkalibacter, Alkalibaculum, Aminicella, Anaerofustis, Eubacterium, Garciella, Irregularibacter, Pseudoramibacter

Family Gracilibacteraceae

Gracilibacter

Family Heliobacteriaceae

Heliobacillus, Heliobacterium, Heliophilum, Heliorestis

Family Lachnospiraceae

Abyssivirga, Acetatifactor, Acetitomaculum, Agathobacter, Anaerocolumna, Anaerostipes, Anaerotaenia, Butyrivibrio, Catonella, Cellulosilyticum, Coprococcus, Cuneatibacter, Dorea, Eisenbergiella, Extibacter, Faecalicatena, Faecalimonas, Frisingicoccus, Herbinix, Hespellia, Johnsonella, Kineothrix, Lachnoanaerobaculum, Lachnobacterium, Lachnospira, Lachnotalea, Marvinbryantia, Merdimonas, Mobilisporobacter, Mobilitalea, Moryella, Muricomes, Murimonas, Oribacterium, Parasporobacterium, Pseudobutyrivibrio, Robinsoniella, Roseburia, Sellimonas, Shuttleworthia, Sporobacterium, Stomatobaculum, Syntrophococcus

Family Peptococcaceae

Cryptanaerobacter, Dehalobacter, Desulfitibacter, Desulfitispora, Desulfitobacterium, Desulfocucumis, Desulfonispora, Desulfosporosinus, Desulfotomaculum, Desulfurispora, Pelotomaculum, Peptococcus, Sporotomaculum, Syntrophobotulus, Thermincola, Thermoterrabacterium

Family Peptostreptococcaceae

Anaerosphaera, Clostridioides, Filifactor, Paeniclostridium, Paraclostridium, Peptoanaerobacter, Peptoclostridium, Peptostreptococcus, Sporacetigenium, Tepidibacter

Family Proteinivoraceae

Proteinivorax

Family Ruminococcaceae

Acetanaerobacterium, Acetivibrio, Acutalibacter, Anaerobacterium, Anaerofilum, Anaerotruncus, Ercella, Ethanoligenens, Faecalibacterium, Fastidiosipila, Fournierella, Harryflintia, Herbivorax, Hydrogenoanaerobacterium, Mageeibacillus, Oscillibacter, Oscillospira, Papillibacter, Pseudobacteroides, Ruminococcus, Ruthenibacterium, Sporobacter, Subdoligranulum

Family Syntrophomonadaceae

Dethiobacter, Fervidicola, Pelospora, Syntrophomonas, Syntrophospora, Syntrophothermus, Thermohydrogenium, Thermosyntropha

Family unassigned

Acetoanaerobium, Acidaminobacter, Anaerobium, Anaerobranca, Anaerococcus, Anaerovirgula, Anaerovorax, Blautia, Carboxydocella, Dethiosulfatibacter, Finegoldia, Flavonifractor, Flintibacter, Fusibacter, Gallicola, Guggenheimella, Helcococcus, Howardella, Intestinimonas, Mogibacterium, Murdochiella, Natranaerovirga, Parvimonas, Peptoniphilus, Proteiniborus, Proteocatella, Pseudoflavonifractor, Sedimentibacter, Soehngenia, Sporanaerobacter, Sulfobacillus, Symbiobacterium, Thermaerobacter, Tissierella

Order Halanaerobiales

Family Halanaerobiaceae

Halanaerobium, Halarsenatibacter, Halocella, Haloincola, Halothermothrix

Family Halobacteroidaceae

Acetohalobium, Fuchsiella, Halanaerobacter, Halanaerobaculum, Halobacteroides, Halonatronum, Natroniella, Orenia, Selenihalanaerobacter, Sporohalobacter

Family unassigned

Anoxybacter

Order Natranaerobiales

Family Natranaerobiaceae

Natranaerobaculum, Natranaerobius, Natronovirga

Order Thermoanaerobacterales

Family Thermoanaerobacteraceae

Acetogenium, Ammonifex, Brockia, Caldanaerobacter, Caldanaerobius, Calderihabitans, Caloribacterium, Carboxydibrachium, Carboxydothermus, Desulfovirgula, Gelria, Moorella, Tepidanaerobacter, Thermacetogenium, Thermanaeromonas, Thermoanaerobacter, Thermoanaerobium, Thermobacteroides, Thermodesulfitimonas

Family Thermodesulfobiaceae

Coprothermobacter, Thermodesulfobium

Family unassigned

Caldanaerovirga, Caldicellulosiruptor, Mahella, Syntrophaceticus, Thermoanaerobacterium, Thermosediminibacter, Thermovenabulum, Thermovorax

Class Erysipelotrichia

Order Erysipelotrichales

Family Erysipelotrichaceae

Allobaculum, Breznakia, Bulleidia, Catenibacterium, Catenisphaera, Coprobacillus, Dielma, Dubosiella, Eggerthia, Erysipelothrix, Faecalibaculum, Holdemania, Ileibacterium, Kandleria, Longibaculum, Longicatena, Solobacterium, Turicibacter

Class Limnochordia

Order Limnochordales

Family Limnochordaceae

Limnochorda

Class Negativicutes

Order Acidaminococcales

Family Acidaminococcaceae

Acidaminococcus, Phascolarctobacterium, Succiniclasticum, Succinispira

Order Selenomonadales

Family Selenomonadaceae

Anaerovibrio, Centipeda, Megamonas, Mitsuokella, Pectinatus, Propionispira, Schwartzia, Selenomonas, Zymophilus

Family Sporomusaceae

Acetonema, Anaeroarcus, Anaeromusa, Anaerosinus, Anaerosporomusa, Dendrosporobacter, Pelosinus, Propionispora, Sporolituus, Sporomusa, Thermosinus

Order Veillonellales

Family Veillonellaceae

Allisonella, Anaeroglobus, Dialister, Megasphaera, Negativicoccus, Quinella, Sporotalea, Veillonella

Class Thermolithobacteria

Order Thermolithobacterales

Family Thermolithobacteraceae

Thermolithobacter

Class Tissierellia

Order Tissierellales

Family Gottschalkiaceae

Andreesenia, Gottschalkia

Order unassigned

Family unassigned

Ezakiella, Kallipyga

Phylum "Fusobacteria" (R)

Class Fusobacteriia

Order Fusobacteriales

Family Fusobacteriaceae

Cetobacterium, Fusobacterium, Ilyobacter, Propionigenium, Psychrilyobacter

Family Leptotrichiaceae

Caviibacter, Leptotrichia, Oceanivirga, Sebaldella, Sneathia, Streptobacillus

Phylum "Gemmatimonadetes" (R)

Class Gemmatimonadetes (R)

Order Gemmatimonadales

Family Gemmatimonadaceae

Gemmatimonas

Class Longimicrobia

Order Longimicrobiales

Family Longimicrobiaceae

Longimicrobium

Phylum "Kiritimatiellaeota" (NR)

Class Kiritimatiellae

Order Kiritimatiellales

Family Kiritimatiellaceae

Kiritimatiella

Phylum "Lentisphaerae" (R)

Class Lentisphaeria

Order Lentisphaerales

Family Lentisphaeraceae

Lentisphaera

Order Victivallales

Family Victivallaceae

Victivallis

Class Oligosphaeria

Order Oligosphaerales

Family Oligosphaeraceae

Oligosphaera

Phylum "Nitrospira" (R) or "Nitrospirae"

Class "Nitrospira" (R)

Order "Nitrospirales"

Family "Nitrospiraceae"

Leptospirillum, Nitrospira, Thermodesulfovibrio

Phylum "Planctomycetes" (R) or "Planctobacteria"

Class "Planctomycetacia" or Planctomycea

Order Planctomycetales

Family Gemmataceae

Fimbriiglobus

Family Isosphaeraceae

Aquisphaera, Paludisphaera, Singulisphaera

Family Planctomycetaceae

Blastopirellula, Gemmata, Gimesia, Isosphaera, Mariniblastus, Pirellula, Planctomyces, Planctopirus, Rhodopirellula, Roseimaritima, Rubinisphaera, Rubripirellula, Schlesneria, Telmatocola, Thermogutta, Thermostilla, Zavarzinella

Class Phycisphaerae

Order Phycisphaerales

Family Phycisphaeraceae

Algisphaera, Phycisphaera

Order Tepidisphaerales

Family Tepidisphaeraceae

Tepidisphaera

Phylum "Proteobacteria" (R)

Class "Zetaproteobacteria"

Order "Mariprofundales"

Family "Mariprofundaceae"

Mariprofundus

Class Alphaproteobacteria

Order "Parvularculales"

Family "Parvularculaceae"

Amphiplicatus, Aquisalinus, Parvularcula

Order Caulobacterales

Family Caulobacteraceae

Asticcacaulis, Brevundimonas, Caulobacter, Phenylobacterium

Family Hyphomonadaceae

Algimonas, Glycocaulis, Hellea, Henriciella, Hirschia, Hyphobacterium, Hyphomonas, Litorimonas, Maribaculum, Maricaulis, Marinicauda, Oceanicaulis, Ponticaulis, Robiginitomaculum, Woodsholea

Order Iodidimonadales

Family Iodidimonadaceae

Iodidimonas

Order Kiloniellales

Family Kiloniellaceae

Kiloniella

Order Kordiimonadales

Family "Kordiimonadaceae"

Kordiimonas

Family Temperatibacteraceae

Temperatibacter

Order Magnetococcales

Family Magnetococcaceae

Magnetococcus

Order Micropepsales

Family Micropepsaceae

Micropepsis

Order Rhizobiales

Family "Aurantimonadaceae"

Aurantimonas, Aureimonas, Fulvimarina, Martelella

Family Bartonellaceae

Bartonella, Grahamella, Rochalimaea

Family Beijerinckiaceae

Beijerinckia, Chelatococcus, Methylocapsa, Methylocella, Methyloferula, Methylorosula, Methylovirgula, Pseudochelatococcus, Rhodoblastus

Family Bradyrhizobiaceae

Afipia, Agromonas, Balneimonas, Blastobacter, Bosea, Bradyrhizobium, Nitrobacter, Oligotropha, Rhodopseudomonas, Salinarimonas, Tardiphaga

Family Brucellaceae

Brucella, Crabtreella, Daeguia, Falsochrobactrum, Mycoplana, Ochrobactrum, Paenochrobactrum, Pseudochrobactrum

Family Chelatococcaceae

Camelimonas

Family Cohaesibacteraceae

Cohaesibacter

Family Hyphomicrobiaceae

Ancalomicrobium, Angulomicrobium, Aquabacter, Arsenicitalea, Blastochloris, Cucumibacter, Devosia, Dichotomicrobium, Filomicrobium, Gemmiger, Hyphomicrobium, Maritalea, Methylorhabdus, Methyloterrigena, Paradevosia, Pedomicrobium, Pelagibacterium, Prosthecomicrobium, Rhodomicrobium, Rhodoplanes, Seliberia, Zhangella

Family Mabikibacteraceae

Mabikibacter

Family Methylobacteriaceae

Enterovirga, Meganema, Methylobacterium, Microvirga, Protomonas

Family Methylocystaceae

Albibacter, Chenggangzhangella, Chthonobacter, Hansschlegelia, Methylocystis, Methylopila, Methylosinus, Oharaeibacter, Pleomorphomonas, Terasakiella

Family Notoacmeibacteraceae

Notoacmeibacter

Family Phyllobacteriaceae

Aminobacter, Aquamicrobium, Chelativorans, Corticibacterium, Defluvibacter, Hoeflea, Lentilitoribacter, Mesorhizobium, Nitratireductor, Oricola, Phyllobacterium, Pseudahrensia, Pseudaminobacter, Roseitalea, Thalassocola, Thermovum, Tianweitania

Family Rhizobiaceae

Agrobacterium, Allorhizobium, Carbophilus, Chelatobacter, Ciceribacter, Ensifer, Kaistia, Methylobrevis, Neorhizobium, Pararhizobium, Rhizobium, Shinella, Sinorhizobium

Family Rhodobiaceae

Afifella, Anderseniella, Butyratibacter, Lutibaculum, Parvibaculum, Rhodobium, Rhodoligotrophos, Roseospirillum, Tepidamorphus, Tepidicaulis

Family Roseiarcaceae

Roseiarcus

Family Xanthobacteraceae

Ancylobacter, Azorhizobium, Labrys, Pseudolabrys, Pseudoxanthobacter, Starkeya, Xanthobacter

Family unassigned

Alsobacter, Amorphus, Bauldia, Methyloceanibacter, Microbaculum, Mongoliimonas, Vasilyevaea

Order Rhodobacterales

Family Rhodobacteraceae

Actibacterium, Acuticoccus, Aestuariihabitans, Aestuariivita, Agaricicola, Ahrensia, Albidovulum, Albimonas, Albirhodobacter, Aliiroseovarius, Alkalimicrobium, Amaricoccus, Amylibacter, Antarctobacter, Aquimixticola, Ascidiaceihabitans, Boseongicola, Brevirhabdus, Catellibacterium, Celeribacter, Cereibacter, Citreicella, Citreimonas, Confluentimicrobium, Cribrihabitans, Defluviimonas, Dinoroseobacter, Donghicola, Epibacterium, Falsirhodobacter, Frigidibacter, Gaetbulicola, Gemmobacter, Haematobacter, Halocynthiibacter, Halodurantibacterium, Halovulum, Hasllibacter, Hwanghaeicola, Jannaschia, Jhaorihella, Ketogulonicigenium, Labrenzia, Leisingera, Lentibacter, Litoreibacter, Litorimicrobium, Litorisediminicola, Litorisediminivivens, Loktanella, Lutimaribacter, Maliponia, Mameliella, Maribius, Marimonas, Marinibacterium, Marinovum, Maritimibacter, Marivita, Marivivens, Methylarcula, Monaibacterium, Nautella, Nereida, Nesiotobacter, Nioella, Oceanibulbus, Oceanicella, Oceanicola, Octadecabacter, Pacificibacter, Paenirhodobacter, Palleronia, Pannonibacter, Paracoccus, Paraphaeobacter, Pararhodobacter, Pelagibaca, Pelagicola, Pelagimonas, Phaeobacter, Planktotalea, Pleomorphobacterium, Pontibaca, Ponticoccus, Pontivivens, Poseidonocella, Primorskyibacter, Profundibacterium, Pseudooceanicola, Pseudooctadecabacter, Pseudorhodobacter, Pseudoroseicyclus, Pseudoroseovarius, Pseudoruegeria, Pseudoseohaeicola, Pseudovibrio, Psychromarinibacter, Rhodobaca, Rhodobacter, Rhodobaculum, Rhodothalassium, Rhodovulum, Roseibaca, Roseibacterium, Roseibium, Roseicitreum, Roseicyclus, Roseinatronobacter, Roseisalinus, Roseivivax, Roseobacter, Roseovarius, Rubellimicrobium, Rubribacterium, Rubricella, Rubrimonas, Ruegeria, Sagittula, Salinihabitans, Salipiger, Sediminimonas, Seohaeicola, Shimia, Silicibacter, Silicimonas, Staleya, Stappia, Sulfitobacter, Tateyamaria, Thalassobacter, Thalassobius, Thalassococcus, Thiobacimonas, Thioclava, Thiosphaera, Tranquillimonas, Tropicibacter, Tropicimonas, Vadicella, Wenxinia, Xuhuaishuia, Yangia

Order Rhodospirillales

Family Acetobacteraceae

Acetobacter, Acidicaldus, Acidiphilium, Acidisoma, Acidisphaera, Acidocella, Acidomonas, Ameyamaea, Asaia, Belnapia, Bombella, Craurococcus, Crenalkalicoccus, Dankookia, Endobacter, Gluconacetobacter, Gluconobacter, Granulibacter, Humitalea, Komagataeibacter, Kozakia, Muricoccus, Neoasaia, Neokomagataea, Nguyenibacter, Paracraurococcus, Rhodopila, Rhodovarius, Roseococcus, Roseomonas, Rubritepida, Saccharibacter, Stella, Swaminathania, Swingsia, Tanticharoenia, Teichococcus, Zavarzinia

Family Rhodospirillaceae

Aestuariispira, Aliidongia, Azospirillum, Caenispirillum, Conglomeromonas, Constrictibacter, Defluviicoccus, Desertibacter, Dongia, Elstera, Ferrovibrio, Fodinicurvata, Haematospirillum, Inquilinus, Insolitispirillum, Lacibacterium, Limibacillus, Limimonas, Magnetospira, Magnetospirillum, Magnetovibrio, Marinibaculum, Marispirillum, Nisaea, Nitrospirillum, Novispirillum, Oceanibaculum, Pelagibius, Phaeospirillum, Phaeovibrio, Rhodocista, Rhodospira, Rhodospirillum, Rhodovibrio, Roseospira, Skermanella, Tagaea, Taonella, Telmatospirillum, Thalassobaculum, Thalassospira, Tistlia, Tistrella, Varunaivibrio

Family unassigned

Elioraea, Reyranella

Order Rickettsiales

Family Anaplasmataceae

Aegyptianella, Anaplasma, Cowdria, Ehrlichia, Neorickettsia, Wolbachia

Family Holosporaceae

Holospora

Family Rickettsiaceae

Occidentia, Orientia, Rickettsia

Family unassigned

Lyticum, Pseudocaedibacter, Symbiotes, Tectibacter

Order Sneathiellales

Family Sneathiellaceae

Oceanibacterium, Sneathiella

Order Sphingomonadales

Family Erythrobacteraceae

Altererythrobacter, Croceicoccus, Erythrobacter, Erythromicrobium, Porphyrobacter, Qipengyuania

Family Sphingomonadaceae

Blastomonas, Erythromonas, Hephaestia, Novosphingobium, Pacificimonas, Parablastomonas, Parasphingopyxis, Polymorphobacter, Sandaracinobacter, Sandarakinorhabdus, Sphingoaurantiacus, Sphingobium, Sphingomicrobium, Sphingomonas, Sphingopyxis, Sphingorhabdus, Sphingosinicella, Stakelama, Zymomonas

Order unassigned

Family unassigned

Breoghania, Eilatimonas, Geminicoccus, Hartmannibacter, Phreatobacter, Rhizomicrobium

Class Betaproteobacteria

Order "Procabacteriales"

Family "Procabacteriaceae"

"Procabacter"

Order Burkholderiales

Family Alcaligenaceae

Achromobacter, Advenella, Alcaligenes, Ampullimonas, Azohydromonas, Bordetella, Brackiella, Caenimicrobium, Candidimonas, Castellaniella, Derxia, Eoetvoesia, Kerstersia, Oligella, Paenalcaligenes, Paracandidimonas, Paralcaligenes, Parapusillimonas, Pelistega, Pigmentiphaga, Pusillimonas, Saccharedens, Taylorella, Tetrathiobacter, Verticia

Family Burkholderiaceae

Burkholderia, Caballeronia, Chitinimonas, Cupriavidus, Formosimonas, Hydromonas, Lautropia, Limnobacter, Mycoavidus, Pandoraea, Paraburkholderia, Paucimonas, Polynucleobacter, Ralstonia, Thermothrix, Wautersia

Family Comamonadaceae

Acidovorax, Albidiferax, Alicycliphilus, Brachymonas, Caenibacterium, Caenimonas, Caldimonas, Comamonas, Corticibacter, Curvibacter, Delftia, Diaphorobacter, Extensimonas, Giesbergeria, Hydrogenophaga, Hylemonella, Kinneretia, Lampropedia, Limnohabitans, Macromonas, Malikia, Melaminivora, Ottowia, Pelomonas, Polaromonas, Pseudacidovorax, Pseudorhodoferax, Ramlibacter, Rhodoferax, Roseateles, Schlegelella, Simplicispira, Tepidicella, Tibeticola, Variovorax, Verminephrobacter, Xenophilus, Zhizhongheella

Family Oxalobacteraceae

Collimonas, Duganella, Glaciimonas, Herbaspirillum, Herminiimonas, Janthinobacterium, Massilia, Naxibacter, Oxalicibacterium, Oxalobacter, Paraherbaspirillum, Pseudoduganella, Telluria, Undibacterium

Family Sutterellaceae

Parasutterella, Sutterella, Turicimonas

Family unassigned

Aquabacterium, Aquincola, Ideonella, Inhella, Leptothrix, Methylibium, Mitsuaria, Paucibacter, Piscinibacter, Piscinibacterium, Rivibacter, Rubrivivax, Sphaerotilus, Tepidimonas, Thiobacter, Thiomonas, Xylophilus

Order Hydrogenophilales

Family Hydrogenophilaceae

Hydrogenophilus, Petrobacter, Tepidiphilus, Thiobacillus

Order Methylophilales

Family Methylophilaceae

Methylobacillus, Methylophilus, Methylovorus

Order Neisseriales

Family Chromobacteriaceae

Andreprevotia, Aquaspirillum, Aquitalea, Chitinibacter, Chitinilyticum, Chitiniphilus, Chromobacterium, Deefgea, Formivibrio, Gulbenkiania, Iodobacter, Jeongeupia, Laribacter, Leeia, Microvirgula, Paludibacterium, Pseudogulbenkiania, Silvimonas, Vogesella

Family Neisseriaceae

Alysiella, Amantichitinum, Bergeriella, Conchiformibius, Crenobacter, Eikenella, Kingella, Morococcus, Neisseria, Prolinoborus, Rivicola, Simonsiella, Snodgrassella, Stenoxybacter, Uruburuella, Vitreoscilla

Order Nitrosomonadales

Family Gallionellaceae

Ferriphaselus, Gallionella

Family Nitrosomonadaceae

Nitrosolobus, Nitrosomonas, Nitrosospira

Family Spirillaceae

Spirillum

Family Thiobacillaceae

Annwoodia, Sulfuritortus

Order Rhodocyclales

Family Rhodocyclaceae

Azoarcus, Azonexus, Azospira, Azovibrio, Dechloromonas, Dechlorosoma, Denitratisoma, Ferribacterium, Georgfuchsia, Methyloversatilis, Niveibacterium, Oryzomicrobium, Propionibacter, Propionivibrio, Quatrionicoccus, Rhodocyclus, Rugosibacter, Sterolibacterium, Sulfurisoma, Sulfuritalea, Thauera, Uliginosibacterium, Zoogloea

Order Sulfuricellales

Family Sulfuricellaceae

Sulfuricella, Sulfuriferula, Sulfurirhabdus

Order unassigned

Family unassigned

Chitinivorax

Class Deltaproteobacteria or Deltabacteria

Order Bdellovibrionales

Family Bacteriovoracaceae

Bacteriovorax, Peredibacter

Family Bdellovibrionaceae

Bdellovibrio, Micavibrio, Vampirovibrio

Family Halobacteriovoraceae

Halobacteriovorax

Family Pseudobacteriovoracaceae

Pseudobacteriovorax

Order Desulfarculales

Family Desulfarculaceae

Desulfarculus, Desulfocarbo

Order Desulfobacterales

Family Desulfobacteraceae

Desulfatibacillum, Desulfatiferula, Desulfatiglans, Desulfatirhabdium, Desulfatitalea, Desulfobacter, Desulfobacterium, Desulfobacula, Desulfobotulus, Desulfocella, Desulfococcus, Desulfoconvexum, Desulfofaba, Desulfofrigus, Desulfoluna, Desulfomusa, Desulfonatronobacter, Desulfonema, Desulforegula, Desulfosalsimonas, Desulfosarcina, Desulfospira, Desulfotignum

Family Desulfobulbaceae

Desulfobulbus, Desulfocapsa, Desulfofustis, Desulfopila, Desulfoprunum, Desulforhopalus, Desulfotalea, Desulfurivibrio

Family Nitrospinaceae

Nitrospina

Order Desulfovibrionales

Family Desulfohalobiaceae

Desulfohalobium Desulfonatronospira Desulfonatronovibrio Desulfonauticus Desulfothermus Desulfovermiculus

Family Desulfomicrobiaceae

Desulfomicrobium Desulfoplanes

Family Desulfonatronaceae

Desulfonatronum

Family Desulfovibrionaceae

Bilophila Desulfobaculum Desulfocurvus Desulfomonas Desulfovibrio Halodesulfovibrio Lawsonia Pseudodesulfovibrio

Order Desulfurellales

Family Desulfurellaceae

Desulfurella Hippea

Order Desulfuromonadales

Family Desulfuromonadaceae

Desulfuromonas Desulfuromusa Malonomonas Pelobacter

Family Geobacteraceae

Geoalkalibacter Geobacter Geopsychrobacter Geothermobacter Trichlorobacter

Order Myxococcales

Suborder Cystobacterineae

Family Cystobacteraceae

Anaeromyxobacter Archangium Cystobacter Hyalangium Melittangium Stigmatella Vitiosangium

Family Myxococcaceae

Aggregicoccus Angiococcus Corallococcus Myxococcus Pyxidicoccus

Suborder Nannocystineae

Family "Haliangiaceae"

Haliangium

Family Kofleriaceae

Kofleria

Family Nannocystaceae

Enhygromyxa Nannocystis Plesiocystis Pseudenhygromyxa

Suborder Sorangiineae

Family Phaselicystidaceae

Phaselicystis

Family Polyangiaceae

Aetherobacter Byssovorax Chondromyces Jahnella Polyangium Racemicystis Sorangium

Family Sandaracinaceae

Sandaracinus

Family unassigned

Minicystis

Order Syntrophobacterales

Family Syntrophaceae

Desulfobacca Desulfomonile Smithella Syntrophus

Family Syntrophobacteraceae

Desulfacinum Desulfoglaeba Desulforhabdus Desulfosoma Desulfovirga Syntrophobacter Thermodesulforhabdus

Order unassigned

Family Syntrophorhabdaceae

Syntrophorhabdus

Family unassigned

Deferrisoma Dissulfuribacter Dissulfurimicrobium Dissulfurirhabdus

Class Epsilonproteobacteria

Order Campylobacterales

Family "Hydrogenimonaceae"

Hydrogenimonas

Family Campylobacteraceae

Arcobacter Campylobacter Dehalospirillum Sulfurospirillum

Family Helicobacteraceae

Helicobacter Sulfuricurvum Sulfurimonas Sulfurovum Thiovulum Wolinella

Order Nautiliales

Family Nautiliaceae

Caminibacter Cetia Lebetimonas Nautilia Nitratifractor Nitratiruptor Thioreductor

Class Gammaproteobacteria

Order "Enterobacteriales"

Family Enterobacteriaceae

Arsenophonus Biostraticola Brenneria Buchnera Budvicia Buttiauxella Calymmatobacterium Cedecea Chania Citrobacter Cosenzaea Cronobacter Dickeya Edwardsiella Enterobacillus Enterobacter Erwinia Escherichia Ewingella Franconibacter Gibbsiella Hafnia Izhakiella Klebsiella Kluyvera Leclercia Leminorella Levinea Lonsdalea Mangrovibacter Moellerella Morganella Obesumbacterium Pantoea Pectobacterium Phaseolibacter Photorhabdus Plesiomonas Pragia Proteus Providencia Rahnella Raoultella Rouxiella Saccharobacter Salmonella Samsonia Serratia Shigella Shimwellia Sodalis Tatumella Thorsellia Trabulsiella Wigglesworthia Xenorhabdus Yersinia Yokenella

Family Thorselliaceae

Coetzeea

Order "Vibrionales"

Family Vibrionaceae

Aliivibrio Allomonas Beneckea Catenococcus Echinimonas Enterovibrio Grimontia Listonella Lucibacterium Paraphotobacterium Photobacterium Salinivibrio Vibrio

Order Acidiferrobacterales

Family Acidiferrobacteraceae

Acidiferrobacter Sulfuricaulis Sulfurifustis

Order Acidithiobacillales

Family Acidithiobacillaceae

Acidithiobacillus

Family Thermithiobacillaceae

Thermithiobacillus

[missing order]

Family Aeromonadaceae

Aeromonas Oceanimonas Oceanisphaera Pseudaeromonas Tolumonas Zobellella

Family Succinivibrionaceae

Anaerobiospirillum Ruminobacter Succinatimonas Succinimonas Succinivibrio

Order Alteromonadales

Family Alteromonadaceae

Aestuariibacter Agaribacter Agarivorans Aliagarivorans Aliiglaciecola Alishewanella Alteromonas Bowmanella Catenovulum Glaciecola Marinobacter Marinobacterium Melitea Planctobacterium Salinimonas Tamilnaduibacter

Family Celerinatantimonadaceae

Celerinatantimonas

Family Colwelliaceae

Colwellia Thalassomonas Thalassotalea

Family Ferrimonadaceae

Ferrimonas Paraferrimonas

Family Idiomarinaceae

Idiomarina Pseudidiomarina

Family Moritellaceae

Moritella Paramoritella

Family Pseudoalteromonadaceae

Algicola Pseudoalteromonas Psychrosphaera

Family Psychromonadaceae

Psychromonas

Family Shewanellaceae

Psychrobium Shewanella

Family unassigned

Aestuariicella Motilimonas Neiella

Order Arenicellales

Family Arenicellaceae

Perspicuibacter

Order Cardiobacteriales

Family Cardiobacteriaceae

Cardiobacterium Dichelobacter Suttonella

Order Cellvibrionales

Family Cellvibrionaceae

Cellvibrio Eionea Gilvimarinus Maricurvus Marinagarivorans Marinimicrobium Pseudomaricurvus Pseudoteredinibacter Saccharophagus Simiduia Teredinibacter Umboniibacter

Family Halieaceae

Chromatocurvus Congregibacter Haliea Halioglobus Luminiphilus Marimicrobium Parahaliea Pseudohaliea

Family Microbulbiferaceae

Microbulbifer

Family Porticoccaceae

Porticoccus

Family Spongiibacteraceae

"Oceanicoccus" Dasania Sinobacterium Spongiibacter Zhongshania

Order Chromatiales

Family Chromatiaceae

Allochromatium Amoebobacter Arsukibacterium Chromatium Halochromatium Imhoffiella Isochromatium Lamprobacter Lamprocystis Marichromatium Nitrosococcus Pfennigia Phaeobacterium Phaeochromatium Rhabdochromatium Rheinheimera Thermochromatium Thioalkalicoccus Thiobaca Thiocapsa Thiococcus Thiocystis Thiodictyon Thioflavicoccus Thiohalocapsa Thiolamprovum Thiopedia Thiophaeococcus Thiorhodococcus Thiorhodovibrio Thiospirillum

Family Ectothiorhodospiraceae

Acidihalobacter Alkalilimnicola Alkalispirillum Aquisalimonas Arhodomonas Ectothiorhodosinus Ectothiorhodospira Halofilum Halopeptonella Halorhodospira Inmirania Natronocella Natronospira Nitrococcus Thioalbus Thioalkalivibrio Thiogranum Thiohalospira Thiorhodospira